Pajun Island was situated in the Pebbled Sea, neighbouring Ragat Island. Pajun was bigger than its northern neighbour Ragat. Across the shore of the Pebbled Sea Pajun's direct neighbours were Emelan to the northwest and Sotat to the east. Farther away were Nidra Island to the south and the Battle Islands to the southwest. Pajun Island was hit by an earthquake in 1035 KF.
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